Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT20P35900 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
KRT20P35900 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT20P35900 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 BX276092.7-203ENST00000637198 1536 ntBASIC16.42■□□□□ 0.22
KRT20P35900 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
KRT20P35900 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 AC012615.1-201ENST00000565797 1299 ntBASIC16.42■□□□□ 0.22
KRT20P35900 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 NPAP1P7-201ENST00000613027 823 ntBASIC16.42■□□□□ 0.22
KRT20P35900 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT20P35900 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
KRT20P35900 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT20P35900 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT20P35900 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT20P35900 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT20P35900 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT20P35900 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT20P35900 KRT17P6-201ENST00000453795 1220 ntBASIC16.41■□□□□ 0.22
KRT20P35900 AC009533.2-201ENST00000543664 586 ntBASIC16.41■□□□□ 0.22
KRT20P35900 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
KRT20P35900 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT20P35900 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KRT20P35900 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
KRT20P35900 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
KRT20P35900 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 AC097374.2-201ENST00000618617 1306 ntBASIC16.41■□□□□ 0.22
KRT20P35900 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT20P35900 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 AC106886.4-201ENST00000623557 2502 ntBASIC16.41■□□□□ 0.22
KRT20P35900 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT20P35900 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT20P35900 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT20P35900 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT20P35900 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms