Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COPB2P35606 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COPB2P35606 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.61■□□□□ 0.73
COPB2P35606 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.61■□□□□ 0.73
COPB2P35606 ADH5P3-201ENST00000433842 1137 ntBASIC19.61■□□□□ 0.73
COPB2P35606 AC140658.5-201ENST00000438532 169 ntBASIC19.61■□□□□ 0.73
COPB2P35606 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.61■□□□□ 0.73
COPB2P35606 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.61■□□□□ 0.73
COPB2P35606 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.61■□□□□ 0.73
COPB2P35606 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COPB2P35606 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.61■□□□□ 0.73
COPB2P35606 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.6■□□□□ 0.73
COPB2P35606 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.6■□□□□ 0.73
COPB2P35606 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.6■□□□□ 0.73
COPB2P35606 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 AC023141.5-201ENST00000458585 616 ntBASIC19.6■□□□□ 0.73
COPB2P35606 HLA-J-203ENST00000494367 1087 ntBASIC19.6■□□□□ 0.73
COPB2P35606 AC107918.2-201ENST00000530817 355 ntBASIC19.6■□□□□ 0.73
COPB2P35606 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 AC025678.2-201ENST00000562061 970 ntBASIC19.6■□□□□ 0.73
COPB2P35606 AC004449.1-201ENST00000564240 433 ntBASIC19.6■□□□□ 0.73
COPB2P35606 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.6■□□□□ 0.73
COPB2P35606 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COPB2P35606 AC092919.2-201ENST00000623631 1645 ntBASIC19.6■□□□□ 0.73
COPB2P35606 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COPB2P35606 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COPB2P35606 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.6■□□□□ 0.73
COPB2P35606 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
COPB2P35606 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPB2P35606 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPB2P35606 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.59■□□□□ 0.73
COPB2P35606 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.59■□□□□ 0.73
COPB2P35606 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 AC106028.4-201ENST00000614509 607 ntBASIC19.59■□□□□ 0.73
COPB2P35606 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 AC093028.1-201ENST00000622998 982 ntBASIC19.59■□□□□ 0.73
COPB2P35606 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
COPB2P35606 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COPB2P35606 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPB2P35606 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.59■□□□□ 0.73
COPB2P35606 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.58■□□□□ 0.73
COPB2P35606 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.58■□□□□ 0.73
COPB2P35606 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.58■□□□□ 0.73
COPB2P35606 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPB2P35606 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms