Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 KRT8P49-201ENST00000604166 1432 ntBASIC18.6■□□□□ 0.57
HOXC8P31273 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HOXC8P31273 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 RNA5SP421-201ENST00000516864 134 ntBASIC18.6■□□□□ 0.57
HOXC8P31273 IGHV3-62-201ENST00000520057 340 ntBASIC18.6■□□□□ 0.57
HOXC8P31273 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 SLC25A39P2-201ENST00000537614 270 ntBASIC18.6■□□□□ 0.57
HOXC8P31273 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.6■□□□□ 0.57
HOXC8P31273 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXC8P31273 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXC8P31273 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HOXC8P31273 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 AC008677.1-201ENST00000519230 1561 ntBASIC18.59■□□□□ 0.57
HOXC8P31273 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.59■□□□□ 0.57
HOXC8P31273 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.59■□□□□ 0.57
HOXC8P31273 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXC8P31273 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.59■□□□□ 0.57
HOXC8P31273 AC140878.1-201ENST00000565277 250 ntBASIC18.59■□□□□ 0.57
HOXC8P31273 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.59■□□□□ 0.57
HOXC8P31273 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HOXC8P31273 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXC8P31273 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 LINC00895-201ENST00000629028 1637 ntBASIC18.59■□□□□ 0.57
HOXC8P31273 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HOXC8P31273 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXC8P31273 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXC8P31273 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.58■□□□□ 0.57
HOXC8P31273 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.58■□□□□ 0.57
HOXC8P31273 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.58■□□□□ 0.57
HOXC8P31273 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC8P31273 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HOXC8P31273 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
HOXC8P31273 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HOXC8P31273 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC8P31273 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 COX20P2-201ENST00000452636 358 ntBASIC18.58■□□□□ 0.56
HOXC8P31273 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HOXC8P31273 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 MIR4745-201ENST00000577608 62 ntBASIC18.58■□□□□ 0.56
HOXC8P31273 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.58■□□□□ 0.56
HOXC8P31273 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC8P31273 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HOXC8P31273 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.58■□□□□ 0.56
HOXC8P31273 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HOXC8P31273 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 AC016027.1-202ENST00000607927 1699 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms