Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BCKDHBP21953 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BCKDHBP21953 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 GNAS-203ENST00000306120 1878 ntBASIC16.9■□□□□ 0.3
BCKDHBP21953 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BCKDHBP21953 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BCKDHBP21953 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BCKDHBP21953 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.9■□□□□ 0.3
BCKDHBP21953 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.9■□□□□ 0.3
BCKDHBP21953 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.9■□□□□ 0.3
BCKDHBP21953 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.9■□□□□ 0.3
BCKDHBP21953 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.9■□□□□ 0.3
BCKDHBP21953 KRT8P23-201ENST00000560090 1207 ntBASIC16.9■□□□□ 0.3
BCKDHBP21953 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 MIR6080-201ENST00000617359 66 ntBASIC16.9■□□□□ 0.3
BCKDHBP21953 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.9■□□□□ 0.3
BCKDHBP21953 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.9■□□□□ 0.3
BCKDHBP21953 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.9■□□□□ 0.3
BCKDHBP21953 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.9■□□□□ 0.3
BCKDHBP21953 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 AC012569.1-201ENST00000591191 1524 ntBASIC16.9■□□□□ 0.3
BCKDHBP21953 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.9■□□□□ 0.3
BCKDHBP21953 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BCKDHBP21953 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
BCKDHBP21953 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.89■□□□□ 0.3
BCKDHBP21953 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BCKDHBP21953 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
BCKDHBP21953 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
BCKDHBP21953 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
BCKDHBP21953 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.89■□□□□ 0.3
BCKDHBP21953 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BCKDHBP21953 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
BCKDHBP21953 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.89■□□□□ 0.29
BCKDHBP21953 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.89■□□□□ 0.29
BCKDHBP21953 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.89■□□□□ 0.29
BCKDHBP21953 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.89■□□□□ 0.29
BCKDHBP21953 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.89■□□□□ 0.29
BCKDHBP21953 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.89■□□□□ 0.29
BCKDHBP21953 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.89■□□□□ 0.29
BCKDHBP21953 AC005412.3-201ENST00000580309 715 ntBASIC16.89■□□□□ 0.29
BCKDHBP21953 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.89■□□□□ 0.29
BCKDHBP21953 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.89■□□□□ 0.29
BCKDHBP21953 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.89■□□□□ 0.29
BCKDHBP21953 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.89■□□□□ 0.29
BCKDHBP21953 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.89■□□□□ 0.29
BCKDHBP21953 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BCKDHBP21953 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BCKDHBP21953 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BCKDHBP21953 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.88■□□□□ 0.29
BCKDHBP21953 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.88■□□□□ 0.29
BCKDHBP21953 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 GK-202ENST00000378941 458 ntTSL 3 BASIC16.88■□□□□ 0.29
BCKDHBP21953 SPDYE7P-202ENST00000420373 878 ntBASIC16.88■□□□□ 0.29
BCKDHBP21953 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 FAM207CP-201ENST00000443486 507 ntBASIC16.88■□□□□ 0.29
BCKDHBP21953 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BCKDHBP21953 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.88■□□□□ 0.29
BCKDHBP21953 AC097493.3-201ENST00000509725 367 ntBASIC16.88■□□□□ 0.29
BCKDHBP21953 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.88■□□□□ 0.29
BCKDHBP21953 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms