Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PDE6GP18545 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC10.67□□□□□ -0.7
PDE6GP18545 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.67□□□□□ -0.7
PDE6GP18545 AL731571.1-201ENST00000617058 5428 ntBASIC10.67□□□□□ -0.7
PDE6GP18545 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC10.67□□□□□ -0.7
PDE6GP18545 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PDE6GP18545 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC10.67□□□□□ -0.7
PDE6GP18545 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PDE6GP18545 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
PDE6GP18545 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 AC009949.1-201ENST00000623048 1830 ntBASIC10.66□□□□□ -0.7
PDE6GP18545 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 RARRES2P10-201ENST00000564312 460 ntBASIC10.66□□□□□ -0.7
PDE6GP18545 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PDE6GP18545 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC10.66□□□□□ -0.7
PDE6GP18545 AC120498.8-201ENST00000614275 531 ntBASIC10.66□□□□□ -0.7
PDE6GP18545 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC10.66□□□□□ -0.7
PDE6GP18545 AC131212.4-201ENST00000623606 975 ntBASIC10.66□□□□□ -0.7
PDE6GP18545 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PDE6GP18545 MBP-202ENST00000355994 2772 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC10.66□□□□□ -0.7
PDE6GP18545 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
PDE6GP18545 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.66□□□□□ -0.7
PDE6GP18545 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PDE6GP18545 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.66□□□□□ -0.7
PDE6GP18545 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
PDE6GP18545 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
PDE6GP18545 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
PDE6GP18545 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 BX276092.7-203ENST00000637198 1536 ntBASIC10.65□□□□□ -0.7
PDE6GP18545 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.65□□□□□ -0.7
PDE6GP18545 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.65□□□□□ -0.7
PDE6GP18545 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PDE6GP18545 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PDE6GP18545 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms