Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HNRNPCL4P0DMR1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AC124067.4-201ENST00000519691 2379 ntBASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 INTS4P1-201ENST00000438455 1935 ntBASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 KRT17P6-201ENST00000453795 1220 ntBASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HNRNPCL4P0DMR1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HNRNPCL4P0DMR1 IER3-202ENST00000376377 1350 ntBASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 FAM210CP-201ENST00000445714 574 ntBASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 TOB2P1-201ENST00000469761 992 ntBASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 GPR89P-201ENST00000407924 1495 ntBASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HNRNPCL4P0DMR1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 NSUN5P1-202ENST00000421140 1535 ntBASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 NSUN5P2-203ENST00000457352 1529 ntBASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HNRNPCL4P0DMR1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms