Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 HBZP1-201ENST00000354915 429 ntBASIC15.53■□□□□ 0.08
HLA-DPB1P04440 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 AC005104.2-201ENST00000427818 678 ntBASIC15.53■□□□□ 0.08
HLA-DPB1P04440 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AC046185.3-201ENST00000623228 1824 ntBASIC15.52■□□□□ 0.08
HLA-DPB1P04440 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 HLA-F-220ENST00000434407 884 ntBASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AL671277.2-201ENST00000458060 996 ntBASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 NTF6B-201ENST00000591913 560 ntBASIC15.52■□□□□ 0.08
HLA-DPB1P04440 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 HYMAI.1-201ENST00000620949 238 ntBASIC15.52■□□□□ 0.08
HLA-DPB1P04440 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DPB1P04440 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DPB1P04440 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 PCDHB17P-201ENST00000539533 2393 ntBASIC15.51■□□□□ 0.07
HLA-DPB1P04440 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.51■□□□□ 0.07
HLA-DPB1P04440 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.51■□□□□ 0.07
HLA-DPB1P04440 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 VENTXP5-201ENST00000523979 775 ntBASIC15.51■□□□□ 0.07
HLA-DPB1P04440 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 AC024563.2-201ENST00000603282 481 ntBASIC15.51■□□□□ 0.07
HLA-DPB1P04440 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DPB1P04440 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms