Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.67■□□□□ 0.42
MT-CO1P00395 NCF1C-201ENST00000438382 1427 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-CO1P00395 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.67■□□□□ 0.42
MT-CO1P00395 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.67■□□□□ 0.42
MT-CO1P00395 LINC00982-205ENST00000420957 435 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.67■□□□□ 0.42
MT-CO1P00395 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.67■□□□□ 0.42
MT-CO1P00395 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-CO1P00395 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.67■□□□□ 0.42
MT-CO1P00395 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.67■□□□□ 0.42
MT-CO1P00395 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.67■□□□□ 0.42
MT-CO1P00395 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-CO1P00395 AC006557.2-201ENST00000592985 1240 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 AL356488.2-201ENST00000602755 427 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 AL671883.3-201ENST00000603274 991 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 AC117500.6-201ENST00000624871 588 ntBASIC17.67■□□□□ 0.42
MT-CO1P00395 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-CO1P00395 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-CO1P00395 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MT-CO1P00395 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 ELK2BP-201ENST00000415014 1224 ntBASIC17.66■□□□□ 0.42
MT-CO1P00395 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-CO1P00395 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 RNA5SP415-201ENST00000517246 115 ntBASIC17.66■□□□□ 0.42
MT-CO1P00395 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-CO1P00395 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MT-CO1P00395 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-CO1P00395 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-CO1P00395 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 PCDHA12-202ENST00000613593 2588 ntBASIC17.66■□□□□ 0.42
MT-CO1P00395 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-CO1P00395 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-CO1P00395 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 AL645608.8-201ENST00000606034 2086 ntBASIC17.65■□□□□ 0.42
MT-CO1P00395 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.65■□□□□ 0.42
MT-CO1P00395 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 AC106730.1-201ENST00000566722 1090 ntBASIC17.65■□□□□ 0.42
MT-CO1P00395 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 AC099398.1-201ENST00000567919 2776 ntBASIC17.65■□□□□ 0.42
MT-CO1P00395 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MT-CO1P00395 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-CO1P00395 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-CO1P00395 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MT-CO1P00395 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.64■□□□□ 0.42
MT-CO1P00395 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.64■□□□□ 0.42
MT-CO1P00395 AC104109.2-201ENST00000602919 1418 ntBASIC17.64■□□□□ 0.42
MT-CO1P00395 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.64■□□□□ 0.42
MT-CO1P00395 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-CO1P00395 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MT-CO1P00395 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms