Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR4O95977 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
S1PR4O95977 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.09■□□□□ 0.33
S1PR4O95977 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 PRYP5-201ENST00000451909 266 ntBASIC17.09■□□□□ 0.33
S1PR4O95977 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.09■□□□□ 0.33
S1PR4O95977 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
S1PR4O95977 AL691432.3-201ENST00000621860 400 ntBASIC17.09■□□□□ 0.33
S1PR4O95977 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.09■□□□□ 0.33
S1PR4O95977 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.09■□□□□ 0.33
S1PR4O95977 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
S1PR4O95977 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 FLJ38576-201ENST00000623820 2459 ntBASIC17.09■□□□□ 0.33
S1PR4O95977 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR4O95977 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR4O95977 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR4O95977 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.08■□□□□ 0.33
S1PR4O95977 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.08■□□□□ 0.33
S1PR4O95977 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
S1PR4O95977 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR4O95977 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.08■□□□□ 0.33
S1PR4O95977 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR4O95977 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR4O95977 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
S1PR4O95977 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.08■□□□□ 0.32
S1PR4O95977 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.08■□□□□ 0.32
S1PR4O95977 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR4O95977 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.08■□□□□ 0.32
S1PR4O95977 LINC00982-205ENST00000420957 435 ntBASIC17.08■□□□□ 0.32
S1PR4O95977 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR4O95977 AC017007.3-201ENST00000479865 435 ntBASIC17.08■□□□□ 0.32
S1PR4O95977 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.08■□□□□ 0.32
S1PR4O95977 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR4O95977 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.08■□□□□ 0.32
S1PR4O95977 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.08■□□□□ 0.32
S1PR4O95977 IFNL4P1-201ENST00000607083 540 ntBASIC17.08■□□□□ 0.32
S1PR4O95977 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
S1PR4O95977 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.08■□□□□ 0.32
S1PR4O95977 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
S1PR4O95977 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR4O95977 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR4O95977 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.07■□□□□ 0.32
S1PR4O95977 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.07■□□□□ 0.32
S1PR4O95977 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 RNF216P1-203ENST00000404404 2427 ntBASIC17.07■□□□□ 0.32
S1PR4O95977 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
S1PR4O95977 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.07■□□□□ 0.32
S1PR4O95977 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.07■□□□□ 0.32
S1PR4O95977 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.07■□□□□ 0.32
S1PR4O95977 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.07■□□□□ 0.32
S1PR4O95977 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
S1PR4O95977 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
S1PR4O95977 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR4O95977 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
S1PR4O95977 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.07■□□□□ 0.32
S1PR4O95977 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
S1PR4O95977 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
S1PR4O95977 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.06■□□□□ 0.32
S1PR4O95977 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
S1PR4O95977 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
S1PR4O95977 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms