Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
RAPGEF3O95398 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RAPGEF3O95398 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
RAPGEF3O95398 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RAPGEF3O95398 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
RAPGEF3O95398 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC25.45■■□□□ 1.66
RAPGEF3O95398 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 SPDYE18-201ENST00000510091 1050 ntBASIC25.44■■□□□ 1.66
RAPGEF3O95398 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 RN7SL828P-201ENST00000607615 303 ntBASIC25.44■■□□□ 1.66
RAPGEF3O95398 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RAPGEF3O95398 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC25.44■■□□□ 1.66
RAPGEF3O95398 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RAPGEF3O95398 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 RASL12-203ENST00000434605 982 ntTSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 COX11-210ENST00000639671 696 ntBASIC25.43■■□□□ 1.66
RAPGEF3O95398 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC25.43■■□□□ 1.66
RAPGEF3O95398 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RAPGEF3O95398 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 TTTY23B-201ENST00000442790 549 ntBASIC25.42■■□□□ 1.66
RAPGEF3O95398 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 MIR6775-201ENST00000617557 69 ntBASIC25.42■■□□□ 1.66
RAPGEF3O95398 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC25.42■■□□□ 1.66
RAPGEF3O95398 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAPGEF3O95398 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 DOC2GP-202ENST00000514950 1163 ntBASIC25.41■■□□□ 1.66
RAPGEF3O95398 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 GPR182-203ENST00000622922 591 ntBASIC25.41■■□□□ 1.66
RAPGEF3O95398 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RAPGEF3O95398 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RAPGEF3O95398 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 PP14571-201ENST00000404327 934 ntTSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 AL080243.2-201ENST00000418783 582 ntBASIC25.4■■□□□ 1.66
RAPGEF3O95398 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 PARP8-218ENST00000513738 596 ntTSL 4 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 FUZ-207ENST00000526575 482 ntTSL 4 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 ZNF890P-202ENST00000530367 1156 ntBASIC25.4■■□□□ 1.66
RAPGEF3O95398 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 AC099568.2-201ENST00000609194 695 ntBASIC25.4■■□□□ 1.66
RAPGEF3O95398 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 HARS-204ENST00000438307 1789 ntTSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC25.4■■□□□ 1.66
RAPGEF3O95398 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF3O95398 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms