Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH8O95206 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH8O95206 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH8O95206 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH8O95206 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH8O95206 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH8O95206 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH8O95206 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH8O95206 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH8O95206 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH8O95206 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PCDH8O95206 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 AC008764.6-201ENST00000595909 2069 ntBASIC17.19■□□□□ 0.34
PCDH8O95206 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 AC007613.1-201ENST00000572811 2597 ntBASIC17.19■□□□□ 0.34
PCDH8O95206 NOC2LP1-202ENST00000452600 2235 ntBASIC17.19■□□□□ 0.34
PCDH8O95206 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH8O95206 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDH8O95206 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH8O95206 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH8O95206 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH8O95206 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH8O95206 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PCDH8O95206 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH8O95206 IGLL3P-201ENST00000412472 434 ntBASIC17.18■□□□□ 0.34
PCDH8O95206 RPS8P6-201ENST00000426177 609 ntBASIC17.18■□□□□ 0.34
PCDH8O95206 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH8O95206 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH8O95206 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH8O95206 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH8O95206 AL513190.1-201ENST00000621254 727 ntBASIC17.18■□□□□ 0.34
PCDH8O95206 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDH8O95206 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH8O95206 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 BCAR1-209ENST00000546196 1340 ntBASIC17.18■□□□□ 0.34
PCDH8O95206 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH8O95206 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH8O95206 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH8O95206 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH8O95206 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH8O95206 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH8O95206 AC096734.2-201ENST00000562054 433 ntBASIC17.17■□□□□ 0.34
PCDH8O95206 OR7E47P-204ENST00000575924 449 ntBASIC17.17■□□□□ 0.34
PCDH8O95206 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDH8O95206 AC004877.2-201ENST00000623941 599 ntBASIC17.17■□□□□ 0.34
PCDH8O95206 AC010507.1-201ENST00000633895 436 ntBASIC17.17■□□□□ 0.34
PCDH8O95206 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH8O95206 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms