Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN3O95197 MED15P5-201ENST00000423150 992 ntBASIC18.16■□□□□ 0.5
RTN3O95197 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN3O95197 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTN3O95197 IGHV3-65-201ENST00000523210 341 ntBASIC18.16■□□□□ 0.5
RTN3O95197 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RTN3O95197 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTN3O95197 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN3O95197 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RTN3O95197 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN3O95197 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN3O95197 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 MIR940-201ENST00000401276 94 ntBASIC18.15■□□□□ 0.5
RTN3O95197 PTCHD3P3-201ENST00000403073 906 ntBASIC18.15■□□□□ 0.5
RTN3O95197 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN3O95197 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 POLD2P1-201ENST00000511220 997 ntBASIC18.15■□□□□ 0.5
RTN3O95197 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.15■□□□□ 0.5
RTN3O95197 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN3O95197 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 AC140113.2-201ENST00000604370 208 ntBASIC18.15■□□□□ 0.5
RTN3O95197 GGTLC5P-201ENST00000617623 998 ntBASIC18.15■□□□□ 0.5
RTN3O95197 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 PMS2P7-201ENST00000506558 1336 ntBASIC18.15■□□□□ 0.5
RTN3O95197 AL590787.1-201ENST00000568856 1315 ntBASIC18.15■□□□□ 0.5
RTN3O95197 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RTN3O95197 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 AL596257.1-201ENST00000641463 2694 ntBASIC18.15■□□□□ 0.5
RTN3O95197 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN3O95197 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RTN3O95197 GNAS-203ENST00000306120 1878 ntBASIC18.14■□□□□ 0.49
RTN3O95197 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RTN3O95197 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.14■□□□□ 0.49
RTN3O95197 AC108073.2-201ENST00000464002 357 ntBASIC18.14■□□□□ 0.49
RTN3O95197 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN3O95197 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTN3O95197 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN3O95197 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTN3O95197 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN3O95197 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN3O95197 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN3O95197 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN3O95197 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms