Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.51■□□□□ 0.39
PMPCBO75439 AC060834.1-201ENST00000443027 2032 ntBASIC17.51■□□□□ 0.39
PMPCBO75439 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.51■□□□□ 0.39
PMPCBO75439 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.51■□□□□ 0.39
PMPCBO75439 UNC93B7-201ENST00000509439 705 ntBASIC17.51■□□□□ 0.39
PMPCBO75439 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.51■□□□□ 0.39
PMPCBO75439 NKAPP1-205ENST00000585790 367 ntBASIC17.51■□□□□ 0.39
PMPCBO75439 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.51■□□□□ 0.39
PMPCBO75439 REXO1L6P-202ENST00000619970 1078 ntBASIC17.51■□□□□ 0.39
PMPCBO75439 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.51■□□□□ 0.39
PMPCBO75439 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PMPCBO75439 AL356309.3-201ENST00000624132 1934 ntBASIC17.51■□□□□ 0.39
PMPCBO75439 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.51■□□□□ 0.39
PMPCBO75439 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PMPCBO75439 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.5■□□□□ 0.39
PMPCBO75439 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
PMPCBO75439 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PMPCBO75439 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 DUSP5P1-201ENST00000441325 1139 ntBASIC17.5■□□□□ 0.39
PMPCBO75439 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PMPCBO75439 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.5■□□□□ 0.39
PMPCBO75439 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 AL355877.3-201ENST00000622820 899 ntBASIC17.5■□□□□ 0.39
PMPCBO75439 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.5■□□□□ 0.39
PMPCBO75439 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PMPCBO75439 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PMPCBO75439 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.49■□□□□ 0.39
PMPCBO75439 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.49■□□□□ 0.39
PMPCBO75439 SAPCD2P3-201ENST00000455031 850 ntBASIC17.49■□□□□ 0.39
PMPCBO75439 FGFR3P6-201ENST00000457012 610 ntBASIC17.49■□□□□ 0.39
PMPCBO75439 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.49■□□□□ 0.39
PMPCBO75439 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.49■□□□□ 0.39
PMPCBO75439 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PMPCBO75439 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.49■□□□□ 0.39
PMPCBO75439 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 EGFEM1P-202ENST00000431685 1563 ntBASIC17.49■□□□□ 0.39
PMPCBO75439 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
PMPCBO75439 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMPCBO75439 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PMPCBO75439 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMPCBO75439 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMPCBO75439 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PMPCBO75439 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.48■□□□□ 0.39
PMPCBO75439 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PMPCBO75439 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms