Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNND1O60716 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CTNND1O60716 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CTNND1O60716 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.02■□□□□ 0.79
CTNND1O60716 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTNND1O60716 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 HMGA1P7-201ENST00000406908 502 ntBASIC20.01■□□□□ 0.79
CTNND1O60716 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 AC067863.1-201ENST00000494933 530 ntBASIC20.01■□□□□ 0.79
CTNND1O60716 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 RARRES2P8-201ENST00000566335 367 ntBASIC20.01■□□□□ 0.79
CTNND1O60716 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.01■□□□□ 0.79
CTNND1O60716 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNND1O60716 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CTNND1O60716 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
CTNND1O60716 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTNND1O60716 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20■□□□□ 0.79
CTNND1O60716 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTNND1O60716 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 AC069335.1-201ENST00000489972 472 ntBASIC20■□□□□ 0.79
CTNND1O60716 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20■□□□□ 0.79
CTNND1O60716 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 DUT-210ENST00000559935 569 ntTSL 3 BASIC20■□□□□ 0.79
CTNND1O60716 AL135744.1-201ENST00000565098 629 ntBASIC20■□□□□ 0.79
CTNND1O60716 AL161645.1-201ENST00000622716 1255 ntBASIC20■□□□□ 0.79
CTNND1O60716 Z92544.3-201ENST00000624747 417 ntBASIC20■□□□□ 0.79
CTNND1O60716 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20■□□□□ 0.79
CTNND1O60716 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNND1O60716 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CTNND1O60716 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.99■□□□□ 0.79
CTNND1O60716 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 AL035633.1-201ENST00000406139 838 ntBASIC19.99■□□□□ 0.79
CTNND1O60716 AL512356.2-201ENST00000546955 174 ntBASIC19.99■□□□□ 0.79
CTNND1O60716 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.99■□□□□ 0.79
CTNND1O60716 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.99■□□□□ 0.79
CTNND1O60716 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.99■□□□□ 0.79
CTNND1O60716 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.99■□□□□ 0.79
CTNND1O60716 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.99■□□□□ 0.79
CTNND1O60716 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.99■□□□□ 0.79
CTNND1O60716 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNND1O60716 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.99■□□□□ 0.79
CTNND1O60716 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.98■□□□□ 0.79
CTNND1O60716 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNND1O60716 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms