Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PLOD3O60568 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PLOD3O60568 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PLOD3O60568 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.27■□□□□ 0.2
PLOD3O60568 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.27■□□□□ 0.2
PLOD3O60568 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.27■□□□□ 0.2
PLOD3O60568 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.27■□□□□ 0.2
PLOD3O60568 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 AL121772.3-201ENST00000610840 674 ntBASIC16.27■□□□□ 0.2
PLOD3O60568 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.27■□□□□ 0.2
PLOD3O60568 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.27■□□□□ 0.2
PLOD3O60568 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PLOD3O60568 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PLOD3O60568 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PLOD3O60568 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.26■□□□□ 0.19
PLOD3O60568 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PLOD3O60568 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.26■□□□□ 0.19
PLOD3O60568 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.26■□□□□ 0.19
PLOD3O60568 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.26■□□□□ 0.19
PLOD3O60568 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.26■□□□□ 0.19
PLOD3O60568 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PLOD3O60568 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PLOD3O60568 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.26■□□□□ 0.19
PLOD3O60568 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.26■□□□□ 0.19
PLOD3O60568 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PLOD3O60568 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PLOD3O60568 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PLOD3O60568 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PLOD3O60568 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.25■□□□□ 0.19
PLOD3O60568 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.25■□□□□ 0.19
PLOD3O60568 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.25■□□□□ 0.19
PLOD3O60568 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PLOD3O60568 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.25■□□□□ 0.19
PLOD3O60568 TSPY19P-201ENST00000418461 509 ntBASIC16.25■□□□□ 0.19
PLOD3O60568 TSPY18P-201ENST00000441642 509 ntBASIC16.25■□□□□ 0.19
PLOD3O60568 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.25■□□□□ 0.19
PLOD3O60568 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.25■□□□□ 0.19
PLOD3O60568 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.25■□□□□ 0.19
PLOD3O60568 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PLOD3O60568 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.25■□□□□ 0.19
PLOD3O60568 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.25■□□□□ 0.19
PLOD3O60568 AC073592.4-201ENST00000623827 446 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms