Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SSSCA1O60232 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.09□□□□□ -0.15
SSSCA1O60232 PAUPAR-201ENST00000630360 2965 ntBASIC14.09□□□□□ -0.15
SSSCA1O60232 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SSSCA1O60232 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSSCA1O60232 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSSCA1O60232 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SSSCA1O60232 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 AC009947.2-201ENST00000444014 672 ntBASIC14.09□□□□□ -0.15
SSSCA1O60232 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.09□□□□□ -0.15
SSSCA1O60232 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.09□□□□□ -0.15
SSSCA1O60232 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.09□□□□□ -0.15
SSSCA1O60232 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSSCA1O60232 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSSCA1O60232 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.09□□□□□ -0.15
SSSCA1O60232 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSSCA1O60232 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSSCA1O60232 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SSSCA1O60232 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSSCA1O60232 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SSSCA1O60232 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.08□□□□□ -0.15
SSSCA1O60232 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSSCA1O60232 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.08□□□□□ -0.15
SSSCA1O60232 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC022188.1-201ENST00000620960 1664 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 ABHD17AP1-201ENST00000358206 933 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 AP001412.1-201ENST00000608405 714 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC113410.3-201ENST00000623366 203 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 AC068418.2-201ENST00000577309 3703 ntBASIC14.08□□□□□ -0.16
SSSCA1O60232 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SSSCA1O60232 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSSCA1O60232 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SSSCA1O60232 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms