Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 PI4KAP1-204ENST00000612579 1703 ntBASIC16.5■□□□□ 0.23
PRICKLE3O43900 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
PRICKLE3O43900 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 DUX4L17-201ENST00000557360 1267 ntBASIC16.5■□□□□ 0.23
PRICKLE3O43900 OR7E47P-204ENST00000575924 449 ntBASIC16.5■□□□□ 0.23
PRICKLE3O43900 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRICKLE3O43900 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRICKLE3O43900 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 AC108751.1-201ENST00000490852 363 ntBASIC16.49■□□□□ 0.23
PRICKLE3O43900 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.49■□□□□ 0.23
PRICKLE3O43900 AC124947.2-201ENST00000547118 1133 ntBASIC16.49■□□□□ 0.23
PRICKLE3O43900 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 AC104109.2-201ENST00000602919 1418 ntBASIC16.49■□□□□ 0.23
PRICKLE3O43900 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 AC004790.2-201ENST00000623588 572 ntBASIC16.49■□□□□ 0.23
PRICKLE3O43900 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRICKLE3O43900 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRICKLE3O43900 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.48■□□□□ 0.23
PRICKLE3O43900 AC087163.2-201ENST00000457299 853 ntBASIC16.48■□□□□ 0.23
PRICKLE3O43900 SLC25A6P2-201ENST00000497974 877 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms