Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL353705.2-201ENST00000428243 662 ntBASIC23.56■■□□□ 1.36
CHD2O14647 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 NAA38-206ENST00000576384 424 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 CHCHD2P3-201ENST00000603038 451 ntBASIC23.56■■□□□ 1.36
CHD2O14647 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CHD2O14647 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CHD2O14647 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 MIR658-201ENST00000385210 100 ntBASIC23.56■■□□□ 1.36
CHD2O14647 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 RASL12-203ENST00000434605 982 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 MTND6P24-201ENST00000440466 518 ntBASIC23.56■■□□□ 1.36
CHD2O14647 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC23.56■■□□□ 1.36
CHD2O14647 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 AL512361.1-201ENST00000554200 418 ntBASIC23.56■■□□□ 1.36
CHD2O14647 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD2O14647 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC23.56■■□□□ 1.36
CHD2O14647 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD2O14647 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC23.56■■□□□ 1.36
CHD2O14647 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD2O14647 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC23.55■■□□□ 1.36
CHD2O14647 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC23.55■■□□□ 1.36
CHD2O14647 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 STARD13-205ENST00000439831 945 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHD2O14647 CYP2A7P1-201ENST00000595391 815 ntBASIC23.55■■□□□ 1.36
CHD2O14647 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC23.55■■□□□ 1.36
CHD2O14647 AC008494.3-201ENST00000606615 944 ntBASIC23.55■■□□□ 1.36
CHD2O14647 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC23.55■■□□□ 1.36
CHD2O14647 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD2O14647 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 EGFEM1P-202ENST00000431685 1563 ntBASIC23.54■■□□□ 1.36
CHD2O14647 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.54■■□□□ 1.36
CHD2O14647 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.54■■□□□ 1.36
CHD2O14647 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC23.54■■□□□ 1.36
CHD2O14647 RN7SL828P-201ENST00000607615 303 ntBASIC23.54■■□□□ 1.36
CHD2O14647 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.54■■□□□ 1.36
CHD2O14647 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHD2O14647 LINC00896-202ENST00000609602 2128 ntBASIC23.54■■□□□ 1.36
CHD2O14647 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CHD2O14647 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
CHD2O14647 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHD2O14647 AC135586.1-201ENST00000539323 574 ntBASIC23.54■■□□□ 1.36
CHD2O14647 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC23.54■■□□□ 1.36
CHD2O14647 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CHD2O14647 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD2O14647 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD2O14647 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHD2O14647 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD2O14647 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD2O14647 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD2O14647 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD2O14647 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.53■■□□□ 1.36
CHD2O14647 KRT17P8-201ENST00000540749 863 ntBASIC23.53■■□□□ 1.36
CHD2O14647 MIR4492-201ENST00000581627 80 ntBASIC23.53■■□□□ 1.36
CHD2O14647 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHD2O14647 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD2O14647 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CHD2O14647 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD2O14647 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHD2O14647 AC007541.1-201ENST00000570282 1469 ntBASIC23.53■■□□□ 1.36
CHD2O14647 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD2O14647 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CHD2O14647 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD2O14647 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD2O14647 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.52■■□□□ 1.36
CHD2O14647 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms