Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.06■□□□□ 0.32
TLR4O00206 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TLR4O00206 AC074386.1-202ENST00000463561 864 ntBASIC17.06■□□□□ 0.32
TLR4O00206 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.06■□□□□ 0.32
TLR4O00206 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
TLR4O00206 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TLR4O00206 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.06■□□□□ 0.32
TLR4O00206 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.06■□□□□ 0.32
TLR4O00206 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.06■□□□□ 0.32
TLR4O00206 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TLR4O00206 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TLR4O00206 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TLR4O00206 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.06■□□□□ 0.32
TLR4O00206 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TLR4O00206 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TLR4O00206 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.05■□□□□ 0.32
TLR4O00206 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.05■□□□□ 0.32
TLR4O00206 AL031432.2-201ENST00000566714 459 ntBASIC17.05■□□□□ 0.32
TLR4O00206 AL928711.1-201ENST00000570165 459 ntBASIC17.05■□□□□ 0.32
TLR4O00206 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
TLR4O00206 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.05■□□□□ 0.32
TLR4O00206 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TLR4O00206 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
TLR4O00206 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TLR4O00206 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.04■□□□□ 0.32
TLR4O00206 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.04■□□□□ 0.32
TLR4O00206 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 CXCL1P1-201ENST00000502804 216 ntBASIC17.04■□□□□ 0.32
TLR4O00206 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.04■□□□□ 0.32
TLR4O00206 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TLR4O00206 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR4O00206 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR4O00206 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TLR4O00206 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.03■□□□□ 0.32
TLR4O00206 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.03■□□□□ 0.32
TLR4O00206 ACTG1P14-201ENST00000446382 1122 ntBASIC17.03■□□□□ 0.32
TLR4O00206 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms