Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDLIM1O00151 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM1O00151 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDLIM1O00151 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PDLIM1O00151 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PDLIM1O00151 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM1O00151 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 AC046185.3-201ENST00000623228 1824 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.45■□□□□ 0.22
PDLIM1O00151 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 AP000523.1-201ENST00000398242 1049 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.45■□□□□ 0.22
PDLIM1O00151 YBX1P2-201ENST00000489612 999 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.45■□□□□ 0.22
PDLIM1O00151 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.45■□□□□ 0.22
PDLIM1O00151 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 AC139887.4-201ENST00000607877 719 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 AL031432.5-201ENST00000641059 760 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM1O00151 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDLIM1O00151 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CYP2T1P-202ENST00000641596 2535 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.45■□□□□ 0.22
PDLIM1O00151 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.45■□□□□ 0.22
PDLIM1O00151 AC016396.2-201ENST00000562575 1417 ntBASIC16.45■□□□□ 0.22
PDLIM1O00151 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDLIM1O00151 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
PDLIM1O00151 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDLIM1O00151 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 FER1L4-210ENST00000615531 5998 ntBASIC16.44■□□□□ 0.22
PDLIM1O00151 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM1O00151 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PDLIM1O00151 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDLIM1O00151 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 DUX4L26-201ENST00000489078 1255 ntBASIC16.44■□□□□ 0.22
PDLIM1O00151 AC009065.1-201ENST00000564055 1225 ntBASIC16.44■□□□□ 0.22
PDLIM1O00151 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.44■□□□□ 0.22
PDLIM1O00151 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PDLIM1O00151 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PDLIM1O00151 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDLIM1O00151 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM1O00151 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM1O00151 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM1O00151 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms