Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL390719.2-201ENST00000606993 987 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 GPR89P-201ENST00000407924 1495 ntBASIC17.93■□□□□ 0.46
CCDC188H7C350 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC188H7C350 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC188H7C350 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC188H7C350 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC188H7C350 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC188H7C350 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC188H7C350 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC188H7C350 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC188H7C350 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC188H7C350 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC188H7C350 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC188H7C350 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC188H7C350 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC188H7C350 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.92■□□□□ 0.46
CCDC188H7C350 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC188H7C350 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC188H7C350 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC188H7C350 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 AL662844.4-201ENST00000606367 2838 ntBASIC17.91■□□□□ 0.46
CCDC188H7C350 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC188H7C350 TUBB8P12-201ENST00000308911 1335 ntBASIC17.91■□□□□ 0.46
CCDC188H7C350 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 TUBB7P-202ENST00000428444 1305 ntBASIC17.91■□□□□ 0.46
CCDC188H7C350 TUBB8P7-204ENST00000567960 1332 ntBASIC17.91■□□□□ 0.46
CCDC188H7C350 AC008741.2-201ENST00000612792 3115 ntBASIC17.91■□□□□ 0.46
CCDC188H7C350 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC188H7C350 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC188H7C350 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC188H7C350 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC188H7C350 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC188H7C350 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC188H7C350 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 AL135999.2-201ENST00000622438 1686 ntBASIC17.9■□□□□ 0.46
CCDC188H7C350 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC188H7C350 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC188H7C350 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC188H7C350 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms