Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.79■□□□□ 0.28
C4orf47A7E2U8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 BICD1-207ENST00000551848 1962 ntBASIC16.78■□□□□ 0.28
C4orf47A7E2U8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 IGHV3-62-201ENST00000520057 340 ntBASIC16.78■□□□□ 0.28
C4orf47A7E2U8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AC026150.2-201ENST00000564693 1156 ntBASIC16.78■□□□□ 0.28
C4orf47A7E2U8 MIR6752-201ENST00000618442 71 ntBASIC16.78■□□□□ 0.28
C4orf47A7E2U8 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.78■□□□□ 0.28
C4orf47A7E2U8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C4orf47A7E2U8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 AC129492.6-201ENST00000611383 1305 ntBASIC16.77■□□□□ 0.28
C4orf47A7E2U8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 RARRES2P8-201ENST00000566335 367 ntBASIC16.77■□□□□ 0.28
C4orf47A7E2U8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.77■□□□□ 0.28
C4orf47A7E2U8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
C4orf47A7E2U8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C4orf47A7E2U8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C4orf47A7E2U8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C4orf47A7E2U8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms