Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 REXO1L3P-201ENST00000622202 1288 ntBASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.44■□□□□ 0.38
TBC1D3BA6NDS4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 RFPL4AP1-201ENST00000530883 850 ntBASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 AC004835.2-201ENST00000603762 682 ntBASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TBC1D3BA6NDS4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 AC027612.4-201ENST00000605371 583 ntBASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TBC1D3BA6NDS4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 AC002056.1-201ENST00000395613 760 ntBASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 CYMP-203ENST00000474680 1263 ntBASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TBC1D3BA6NDS4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms