Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 AC019069.1-201ENST00000610008 1333 ntBASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
SCN10AQ9Y5Y9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SCN10AQ9Y5Y9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.03■■□□□ 1.92
SCN10AQ9Y5Y9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 AL356441.2-201ENST00000443009 864 ntBASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SCN10AQ9Y5Y9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
SCN10AQ9Y5Y9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
SCN10AQ9Y5Y9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27■■□□□ 1.91
SCN10AQ9Y5Y9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27■■□□□ 1.91
SCN10AQ9Y5Y9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 LONRF2P2-201ENST00000439212 571 ntBASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SCN10AQ9Y5Y9 AC022616.5-201ENST00000518796 181 ntBASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SCN10AQ9Y5Y9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 AC239859.2-201ENST00000444165 318 ntBASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.97■■□□□ 1.91
SCN10AQ9Y5Y9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
SCN10AQ9Y5Y9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SCN10AQ9Y5Y9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.94■■□□□ 1.9
SCN10AQ9Y5Y9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 KRT18P10-201ENST00000388836 1287 ntBASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SCN10AQ9Y5Y9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.92■■□□□ 1.9
SCN10AQ9Y5Y9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SCN10AQ9Y5Y9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SCN10AQ9Y5Y9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
SCN10AQ9Y5Y9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
SCN10AQ9Y5Y9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 BX664725.1-201ENST00000438252 379 ntBASIC26.88■■□□□ 1.89
SCN10AQ9Y5Y9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SCN10AQ9Y5Y9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms