Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA6Q9Y5G7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 DUX4L9-201ENST00000449051 1259 ntBASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA6Q9Y5G7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHGA6Q9Y5G7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA6Q9Y5G7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDHGA6Q9Y5G7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA6Q9Y5G7 AC074183.2-201ENST00000623112 922 ntBASIC23.23■■□□□ 1.31
PCDHGA6Q9Y5G7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA6Q9Y5G7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA6Q9Y5G7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA6Q9Y5G7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGA6Q9Y5G7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA6Q9Y5G7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA6Q9Y5G7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGA6Q9Y5G7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA6Q9Y5G7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PCDHGA6Q9Y5G7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA6Q9Y5G7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PCDHGA6Q9Y5G7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA6Q9Y5G7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA6Q9Y5G7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHGA6Q9Y5G7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA6Q9Y5G7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 SPCS2P3-201ENST00000500401 656 ntBASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA6Q9Y5G7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 AC091060.1-201ENST00000623524 1766 ntBASIC23.18■■□□□ 1.3
PCDHGA6Q9Y5G7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA6Q9Y5G7 MIR6765-201ENST00000614092 87 ntBASIC23.17■■□□□ 1.3
PCDHGA6Q9Y5G7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA6Q9Y5G7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA6Q9Y5G7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA6Q9Y5G7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA6Q9Y5G7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA6Q9Y5G7 BHLHE23-202ENST00000612929 1109 ntBASIC23.15■■□□□ 1.3
PCDHGA6Q9Y5G7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA6Q9Y5G7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA6Q9Y5G7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA6Q9Y5G7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDHGA6Q9Y5G7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA6Q9Y5G7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA6Q9Y5G7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHGA6Q9Y5G7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA6Q9Y5G7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 AC018755.3-202ENST00000596210 929 ntBASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 AL035685.1-201ENST00000636663 812 ntBASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PCDHGA6Q9Y5G7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 AL359504.2-201ENST00000605506 1601 ntBASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 AL451085.2-201ENST00000605085 799 ntBASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA6Q9Y5G7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 AC139795.1-202ENST00000500444 432 ntBASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA6Q9Y5G7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms