Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 AC068473.5-201ENST00000616428 2072 ntBASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGB1Q9Y5G3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDHGB1Q9Y5G3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGB1Q9Y5G3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGB1Q9Y5G3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGB1Q9Y5G3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGB1Q9Y5G3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 WHAMMP3-201ENST00000611636 1609 ntBASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB1Q9Y5G3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB1Q9Y5G3 AC079834.2-201ENST00000609776 1949 ntBASIC22.02■■□□□ 1.12
PCDHGB1Q9Y5G3 HLA-V-202ENST00000446817 847 ntBASIC22.02■■□□□ 1.12
PCDHGB1Q9Y5G3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.02■■□□□ 1.12
PCDHGB1Q9Y5G3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB1Q9Y5G3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHGB1Q9Y5G3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB1Q9Y5G3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 AC087741.3-201ENST00000624270 1347 ntBASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGB1Q9Y5G3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGB1Q9Y5G3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB1Q9Y5G3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGB1Q9Y5G3 DUX4L28-201ENST00000623687 678 ntBASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 AC110285.7-201ENST00000624417 1536 ntBASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB1Q9Y5G3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms