Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBQLN2Q9UHD9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
UBQLN2Q9UHD9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN2Q9UHD9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN2Q9UHD9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN2Q9UHD9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN2Q9UHD9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBQLN2Q9UHD9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBQLN2Q9UHD9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN2Q9UHD9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN2Q9UHD9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN2Q9UHD9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN2Q9UHD9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN2Q9UHD9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN2Q9UHD9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 AL024507.2-201ENST00000606070 2574 ntBASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 AP002414.2-202ENST00000590929 1450 ntBASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN2Q9UHD9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 AC022211.4-201ENST00000625094 2161 ntBASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN2Q9UHD9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
UBQLN2Q9UHD9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN2Q9UHD9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN2Q9UHD9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBQLN2Q9UHD9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 AC097639.1-201ENST00000565519 1891 ntBASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBQLN2Q9UHD9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN2Q9UHD9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN2Q9UHD9 DUSP8P5-201ENST00000422884 1815 ntBASIC20.12■□□□□ 0.81
UBQLN2Q9UHD9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN2Q9UHD9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBQLN2Q9UHD9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.11■□□□□ 0.81
UBQLN2Q9UHD9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBQLN2Q9UHD9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 WHAMMP3-201ENST00000611636 1609 ntBASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 AC100797.4-201ENST00000631653 1827 ntBASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBQLN2Q9UHD9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.08■□□□□ 0.81
UBQLN2Q9UHD9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms