Protein–RNA interactions for Protein: Q9UGI6

KCNN3, Small conductance calcium-activated potassium channel protein 3, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN3Q9UGI6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KCNN3Q9UGI6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.83■■□□□ 1.09
KCNN3Q9UGI6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
KCNN3Q9UGI6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 LINC01003-201ENST00000564834 1764 ntBASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
KCNN3Q9UGI6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNN3Q9UGI6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 AL451085.2-201ENST00000605085 799 ntBASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNN3Q9UGI6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 AC026202.3-201ENST00000600805 1127 ntBASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 AC074183.2-201ENST00000623112 922 ntBASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNN3Q9UGI6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNN3Q9UGI6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNN3Q9UGI6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KCNN3Q9UGI6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNN3Q9UGI6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 AL359258.2-201ENST00000564063 1566 ntBASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNN3Q9UGI6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNN3Q9UGI6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.76■■□□□ 1.07
KCNN3Q9UGI6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
KCNN3Q9UGI6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 BHLHE23-202ENST00000612929 1109 ntBASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNN3Q9UGI6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 RP9P-202ENST00000450133 1212 ntBASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 AC025884.2-201ENST00000553429 711 ntBASIC21.74■■□□□ 1.07
KCNN3Q9UGI6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
KCNN3Q9UGI6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 DUX4L9-201ENST00000449051 1259 ntBASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNN3Q9UGI6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNN3Q9UGI6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
KCNN3Q9UGI6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KCNN3Q9UGI6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KCNN3Q9UGI6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms