Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.13■■□□□ 1.61
PCDH18Q9HCL0 SMPD5-203ENST00000639008 1464 ntBASIC25.13■■□□□ 1.61
PCDH18Q9HCL0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH18Q9HCL0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PCDH18Q9HCL0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH18Q9HCL0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 GPX1-201ENST00000419349 1106 ntBASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PCDH18Q9HCL0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PCDH18Q9HCL0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH18Q9HCL0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH18Q9HCL0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH18Q9HCL0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDH18Q9HCL0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH18Q9HCL0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH18Q9HCL0 MIR3960-201ENST00000583311 91 ntBASIC25.08■■□□□ 1.61
PCDH18Q9HCL0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDH18Q9HCL0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH18Q9HCL0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH18Q9HCL0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH18Q9HCL0 AC096887.2-201ENST00000623443 1957 ntBASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH18Q9HCL0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDH18Q9HCL0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDH18Q9HCL0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDH18Q9HCL0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDH18Q9HCL0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH18Q9HCL0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDH18Q9HCL0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDH18Q9HCL0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDH18Q9HCL0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH18Q9HCL0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH18Q9HCL0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 AC020928.2-201ENST00000588717 2197 ntBASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH18Q9HCL0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH18Q9HCL0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25■■□□□ 1.59
PCDH18Q9HCL0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25■■□□□ 1.59
PCDH18Q9HCL0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH18Q9HCL0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH18Q9HCL0 RP9P-202ENST00000450133 1212 ntBASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 AC007029.1-201ENST00000604183 313 ntBASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH18Q9HCL0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDH18Q9HCL0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
PCDH18Q9HCL0 AC093536.1-201ENST00000569153 554 ntBASIC24.97■■□□□ 1.59
PCDH18Q9HCL0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PCDH18Q9HCL0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH18Q9HCL0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH18Q9HCL0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH18Q9HCL0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.96■■□□□ 1.59
PCDH18Q9HCL0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH18Q9HCL0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH18Q9HCL0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms