Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 LINC00543-201ENST00000567234 1845 ntBASIC14.22□□□□□ -0.13
LIMD2Q9BT23 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.21□□□□□ -0.13
LIMD2Q9BT23 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
LIMD2Q9BT23 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIMD2Q9BT23 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 CR559946.2-201ENST00000623684 991 ntBASIC14.19□□□□□ -0.14
LIMD2Q9BT23 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMD2Q9BT23 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 MIR3648-2-201ENST00000581792 180 ntBASIC14.18□□□□□ -0.14
LIMD2Q9BT23 MIR3648-1-201ENST00000615959 180 ntBASIC14.18□□□□□ -0.14
LIMD2Q9BT23 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMD2Q9BT23 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMD2Q9BT23 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMD2Q9BT23 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 MIR7108-201ENST00000614319 87 ntBASIC14.15□□□□□ -0.14
LIMD2Q9BT23 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LIMD2Q9BT23 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms