Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF5Q99942 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF5Q99942 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF5Q99942 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF5Q99942 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF5Q99942 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF5Q99942 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF5Q99942 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF5Q99942 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF5Q99942 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF5Q99942 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF5Q99942 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF5Q99942 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF5Q99942 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF5Q99942 RP9P-202ENST00000450133 1212 ntBASIC19.38■□□□□ 0.69
RNF5Q99942 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF5Q99942 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF5Q99942 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF5Q99942 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF5Q99942 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF5Q99942 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF5Q99942 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF5Q99942 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF5Q99942 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF5Q99942 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF5Q99942 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF5Q99942 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF5Q99942 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF5Q99942 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF5Q99942 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF5Q99942 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF5Q99942 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF5Q99942 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF5Q99942 AC007029.1-201ENST00000604183 313 ntBASIC19.34■□□□□ 0.69
RNF5Q99942 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF5Q99942 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF5Q99942 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF5Q99942 ERN1-208ENST00000606895 2068 ntBASIC19.34■□□□□ 0.69
RNF5Q99942 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF5Q99942 RNF126P1-201ENST00000567452 1320 ntBASIC19.33■□□□□ 0.69
RNF5Q99942 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF5Q99942 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF5Q99942 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
RNF5Q99942 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
RNF5Q99942 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF5Q99942 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF5Q99942 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF5Q99942 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RNF5Q99942 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF5Q99942 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.32■□□□□ 0.68
RNF5Q99942 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF5Q99942 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF5Q99942 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF5Q99942 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF5Q99942 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF5Q99942 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF5Q99942 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF5Q99942 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF5Q99942 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF5Q99942 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 AC093536.1-201ENST00000569153 554 ntBASIC19.3■□□□□ 0.68
RNF5Q99942 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF5Q99942 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF5Q99942 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF5Q99942 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF5Q99942 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RNF5Q99942 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF5Q99942 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF5Q99942 KRT18P10-201ENST00000388836 1287 ntBASIC19.29■□□□□ 0.68
RNF5Q99942 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RNF5Q99942 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF5Q99942 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF5Q99942 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
RNF5Q99942 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF5Q99942 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.28■□□□□ 0.68
RNF5Q99942 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF5Q99942 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF5Q99942 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF5Q99942 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RNF5Q99942 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF5Q99942 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF5Q99942 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF5Q99942 AC096887.2-201ENST00000623443 1957 ntBASIC19.26■□□□□ 0.67
RNF5Q99942 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF5Q99942 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF5Q99942 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF5Q99942 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF5Q99942 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms