Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RPGRQ92834 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RPGRQ92834 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.24■■■□□ 2.43
RPGRQ92834 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPGRQ92834 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.22■■■□□ 2.43
RPGRQ92834 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.22■■■□□ 2.43
RPGRQ92834 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RPGRQ92834 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.22■■■□□ 2.43
RPGRQ92834 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.21■■■□□ 2.43
RPGRQ92834 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RPGRQ92834 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RPGRQ92834 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.2■■■□□ 2.43
RPGRQ92834 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
RPGRQ92834 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RPGRQ92834 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
RPGRQ92834 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
RPGRQ92834 AL449106.1-201ENST00000608517 1980 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RPGRQ92834 KRT18P10-201ENST00000388836 1287 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
RPGRQ92834 KRT125P-201ENST00000546827 989 ntBASIC30.19■■■□□ 2.42
RPGRQ92834 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RPGRQ92834 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RPGRQ92834 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.18■■■□□ 2.42
RPGRQ92834 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RPGRQ92834 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 AC022616.5-201ENST00000518796 181 ntBASIC30.17■■■□□ 2.42
RPGRQ92834 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPGRQ92834 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RPGRQ92834 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.16■■■□□ 2.42
RPGRQ92834 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RPGRQ92834 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
RPGRQ92834 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
RPGRQ92834 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
RPGRQ92834 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
RPGRQ92834 BX664725.1-201ENST00000438252 379 ntBASIC30.15■■■□□ 2.42
RPGRQ92834 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.15■■■□□ 2.42
RPGRQ92834 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPGRQ92834 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPGRQ92834 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.14■■■□□ 2.42
RPGRQ92834 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RPGRQ92834 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.13■■■□□ 2.41
RPGRQ92834 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.13■■■□□ 2.41
RPGRQ92834 MIR4787-201ENST00000607364 84 ntBASIC30.13■■■□□ 2.41
RPGRQ92834 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
RPGRQ92834 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 AC008406.3-201ENST00000620001 1374 ntBASIC30.12■■■□□ 2.41
RPGRQ92834 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
RPGRQ92834 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPGRQ92834 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
RPGRQ92834 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPGRQ92834 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
RPGRQ92834 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
RPGRQ92834 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.1■■■□□ 2.41
RPGRQ92834 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.1■■■□□ 2.41
RPGRQ92834 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPGRQ92834 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.1■■■□□ 2.41
RPGRQ92834 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
RPGRQ92834 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
RPGRQ92834 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.09■■■□□ 2.41
RPGRQ92834 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RPGRQ92834 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.08■■■□□ 2.41
RPGRQ92834 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 DRD5P2-201ENST00000421395 2012 ntBASIC30.08■■■□□ 2.41
RPGRQ92834 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.08■■■□□ 2.41
RPGRQ92834 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
RPGRQ92834 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.07■■■□□ 2.4
RPGRQ92834 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.07■■■□□ 2.4
RPGRQ92834 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 KRT18P24-201ENST00000344739 1156 ntBASIC30.06■■■□□ 2.4
RPGRQ92834 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.06■■■□□ 2.4
RPGRQ92834 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RPGRQ92834 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms