Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40AQ8WXH6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 AC110285.7-201ENST00000624417 1536 ntBASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 AC008813.1-201ENST00000536597 885 ntBASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40AQ8WXH6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RAB40AQ8WXH6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RAB40AQ8WXH6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB40AQ8WXH6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAB40AQ8WXH6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB40AQ8WXH6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAB40AQ8WXH6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RAB40AQ8WXH6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40AQ8WXH6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB40AQ8WXH6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40AQ8WXH6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.07■□□□□ 0.96
RAB40AQ8WXH6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB40AQ8WXH6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40AQ8WXH6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40AQ8WXH6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40AQ8WXH6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40AQ8WXH6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40AQ8WXH6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAB40AQ8WXH6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40AQ8WXH6 AL139125.2-201ENST00000623134 1869 ntBASIC21.02■□□□□ 0.96
RAB40AQ8WXH6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RAB40AQ8WXH6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.02■□□□□ 0.95
RAB40AQ8WXH6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB40AQ8WXH6 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.01■□□□□ 0.95
RAB40AQ8WXH6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB40AQ8WXH6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40AQ8WXH6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40AQ8WXH6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RAB40AQ8WXH6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 AC022211.4-201ENST00000625094 2161 ntBASIC21■□□□□ 0.95
RAB40AQ8WXH6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40AQ8WXH6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40AQ8WXH6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms