Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.05■■□□□ 1.44
PPP4R1Q8TF05 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.05■■□□□ 1.44
PPP4R1Q8TF05 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
PPP4R1Q8TF05 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R1Q8TF05 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.04■■□□□ 1.44
PPP4R1Q8TF05 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R1Q8TF05 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R1Q8TF05 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R1Q8TF05 AC010501.1-201ENST00000606270 1962 ntBASIC24.03■■□□□ 1.44
PPP4R1Q8TF05 ERN1-208ENST00000606895 2068 ntBASIC24.03■■□□□ 1.44
PPP4R1Q8TF05 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.03■■□□□ 1.44
PPP4R1Q8TF05 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R1Q8TF05 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PPP4R1Q8TF05 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R1Q8TF05 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
PPP4R1Q8TF05 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
PPP4R1Q8TF05 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PPP4R1Q8TF05 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24■■□□□ 1.43
PPP4R1Q8TF05 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24■■□□□ 1.43
PPP4R1Q8TF05 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PPP4R1Q8TF05 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPP4R1Q8TF05 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.98■■□□□ 1.43
PPP4R1Q8TF05 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PPP4R1Q8TF05 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PPP4R1Q8TF05 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.97■■□□□ 1.43
PPP4R1Q8TF05 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 AC142381.3-201ENST00000568208 1670 ntBASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 AC008813.1-201ENST00000536597 885 ntBASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPP4R1Q8TF05 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PPP4R1Q8TF05 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.95■■□□□ 1.42
PPP4R1Q8TF05 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PPP4R1Q8TF05 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PPP4R1Q8TF05 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPP4R1Q8TF05 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
PPP4R1Q8TF05 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
PPP4R1Q8TF05 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPP4R1Q8TF05 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PPP4R1Q8TF05 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PPP4R1Q8TF05 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PPP4R1Q8TF05 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PPP4R1Q8TF05 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.92■■□□□ 1.42
PPP4R1Q8TF05 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.91■■□□□ 1.42
PPP4R1Q8TF05 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.91■■□□□ 1.42
PPP4R1Q8TF05 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.91■■□□□ 1.42
PPP4R1Q8TF05 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms