Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN22Q8N7P3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.97■■□□□ 1.11
CLDN22Q8N7P3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CLDN22Q8N7P3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
CLDN22Q8N7P3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 MIR3648-2-201ENST00000581792 180 ntBASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 MIR3648-1-201ENST00000615959 180 ntBASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CLDN22Q8N7P3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CLDN22Q8N7P3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CLDN22Q8N7P3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN22Q8N7P3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN22Q8N7P3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDN22Q8N7P3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLDN22Q8N7P3 AC016575.1-201ENST00000607026 382 ntBASIC21.93■■□□□ 1.1
CLDN22Q8N7P3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN22Q8N7P3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CLDN22Q8N7P3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN22Q8N7P3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN22Q8N7P3 AC096887.2-201ENST00000623443 1957 ntBASIC21.92■■□□□ 1.1
CLDN22Q8N7P3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN22Q8N7P3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN22Q8N7P3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN22Q8N7P3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.9■■□□□ 1.1
CLDN22Q8N7P3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN22Q8N7P3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN22Q8N7P3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN22Q8N7P3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.89■■□□□ 1.1
CLDN22Q8N7P3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.89■■□□□ 1.1
CLDN22Q8N7P3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 MIR7108-201ENST00000614319 87 ntBASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN22Q8N7P3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN22Q8N7P3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 AC022211.4-201ENST00000625094 2161 ntBASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 AL359258.2-201ENST00000564063 1566 ntBASIC21.87■■□□□ 1.09
CLDN22Q8N7P3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms