Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCUBE1Q8IWY4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SCUBE1Q8IWY4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCUBE1Q8IWY4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SCUBE1Q8IWY4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SCUBE1Q8IWY4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SCUBE1Q8IWY4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE1Q8IWY4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE1Q8IWY4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.69■■□□□ 1.38
SCUBE1Q8IWY4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 AC148477.6-201ENST00000623746 465 ntBASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE1Q8IWY4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 AC142381.3-201ENST00000568208 1670 ntBASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE1Q8IWY4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
SCUBE1Q8IWY4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCUBE1Q8IWY4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.66■■□□□ 1.38
SCUBE1Q8IWY4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.66■■□□□ 1.38
SCUBE1Q8IWY4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCUBE1Q8IWY4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.65■■□□□ 1.38
SCUBE1Q8IWY4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCUBE1Q8IWY4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCUBE1Q8IWY4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.64■■□□□ 1.38
SCUBE1Q8IWY4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCUBE1Q8IWY4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCUBE1Q8IWY4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
SCUBE1Q8IWY4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCUBE1Q8IWY4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.63■■□□□ 1.37
SCUBE1Q8IWY4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 MIR219A2-201ENST00000608502 1504 ntBASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE1Q8IWY4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 AC133561.1-201ENST00000568600 2415 ntBASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE1Q8IWY4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms