Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NPAS4Q8IUM7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPAS4Q8IUM7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
NPAS4Q8IUM7 AL449106.1-201ENST00000608517 1980 ntBASIC26.33■■□□□ 1.8
NPAS4Q8IUM7 KRT18P10-201ENST00000388836 1287 ntBASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 Z92544.1-202ENST00000571933 1220 ntBASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPAS4Q8IUM7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NPAS4Q8IUM7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.31■■□□□ 1.8
NPAS4Q8IUM7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NPAS4Q8IUM7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NPAS4Q8IUM7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NPAS4Q8IUM7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NPAS4Q8IUM7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPAS4Q8IUM7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.28■■□□□ 1.8
NPAS4Q8IUM7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPAS4Q8IUM7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.28■■□□□ 1.8
NPAS4Q8IUM7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NPAS4Q8IUM7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.27■■□□□ 1.8
NPAS4Q8IUM7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPAS4Q8IUM7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPAS4Q8IUM7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPAS4Q8IUM7 AC022616.5-201ENST00000518796 181 ntBASIC26.26■■□□□ 1.79
NPAS4Q8IUM7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NPAS4Q8IUM7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.26■■□□□ 1.79
NPAS4Q8IUM7 LINC01003-201ENST00000564834 1764 ntBASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NPAS4Q8IUM7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
NPAS4Q8IUM7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NPAS4Q8IUM7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
NPAS4Q8IUM7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.23■■□□□ 1.79
NPAS4Q8IUM7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NPAS4Q8IUM7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
NPAS4Q8IUM7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
NPAS4Q8IUM7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
NPAS4Q8IUM7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 AC139426.1-201ENST00000568218 2529 ntBASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
NPAS4Q8IUM7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
NPAS4Q8IUM7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NPAS4Q8IUM7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NPAS4Q8IUM7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NPAS4Q8IUM7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.2■■□□□ 1.78
NPAS4Q8IUM7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 AC019069.1-201ENST00000610008 1333 ntBASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NPAS4Q8IUM7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 KRT125P-201ENST00000546827 989 ntBASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPAS4Q8IUM7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 BX664725.1-201ENST00000438252 379 ntBASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
NPAS4Q8IUM7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms