Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ZC3HC1Q86WB0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ZC3HC1Q86WB0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
ZC3HC1Q86WB0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ZC3HC1Q86WB0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
ZC3HC1Q86WB0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ZC3HC1Q86WB0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
ZC3HC1Q86WB0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
ZC3HC1Q86WB0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3HC1Q86WB0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3HC1Q86WB0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.06■■□□□ 1.44
ZC3HC1Q86WB0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.06■■□□□ 1.44
ZC3HC1Q86WB0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3HC1Q86WB0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3HC1Q86WB0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.04■■□□□ 1.44
ZC3HC1Q86WB0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3HC1Q86WB0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3HC1Q86WB0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
ZC3HC1Q86WB0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3HC1Q86WB0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3HC1Q86WB0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3HC1Q86WB0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
ZC3HC1Q86WB0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZC3HC1Q86WB0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZC3HC1Q86WB0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24■■□□□ 1.43
ZC3HC1Q86WB0 MIR7108-201ENST00000614319 87 ntBASIC24■■□□□ 1.43
ZC3HC1Q86WB0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3HC1Q86WB0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
ZC3HC1Q86WB0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24■■□□□ 1.43
ZC3HC1Q86WB0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZC3HC1Q86WB0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 AL157400.5-201ENST00000507624 621 ntBASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 AC142381.3-201ENST00000568208 1670 ntBASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZC3HC1Q86WB0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.97■■□□□ 1.43
ZC3HC1Q86WB0 AC022211.4-201ENST00000625094 2161 ntBASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZC3HC1Q86WB0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
ZC3HC1Q86WB0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3HC1Q86WB0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ZC3HC1Q86WB0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 AC060814.1-201ENST00000554326 538 ntBASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ZC3HC1Q86WB0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms