Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COLCA1Q6ZS62 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COLCA1Q6ZS62 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COLCA1Q6ZS62 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COLCA1Q6ZS62 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COLCA1Q6ZS62 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 RP9P-202ENST00000450133 1212 ntBASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 AC007029.1-201ENST00000604183 313 ntBASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COLCA1Q6ZS62 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COLCA1Q6ZS62 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COLCA1Q6ZS62 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COLCA1Q6ZS62 RNF126P1-201ENST00000567452 1320 ntBASIC20.9■□□□□ 0.94
COLCA1Q6ZS62 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COLCA1Q6ZS62 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
COLCA1Q6ZS62 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.89■□□□□ 0.94
COLCA1Q6ZS62 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.89■□□□□ 0.93
COLCA1Q6ZS62 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 AC096887.2-201ENST00000623443 1957 ntBASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.88■□□□□ 0.93
COLCA1Q6ZS62 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COLCA1Q6ZS62 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COLCA1Q6ZS62 AC093536.1-201ENST00000569153 554 ntBASIC20.87■□□□□ 0.93
COLCA1Q6ZS62 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COLCA1Q6ZS62 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.87■□□□□ 0.93
COLCA1Q6ZS62 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COLCA1Q6ZS62 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COLCA1Q6ZS62 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COLCA1Q6ZS62 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COLCA1Q6ZS62 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COLCA1Q6ZS62 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.85■□□□□ 0.93
COLCA1Q6ZS62 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COLCA1Q6ZS62 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COLCA1Q6ZS62 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COLCA1Q6ZS62 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COLCA1Q6ZS62 RAP2CP1-202ENST00000605179 643 ntBASIC20.84■□□□□ 0.93
COLCA1Q6ZS62 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COLCA1Q6ZS62 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COLCA1Q6ZS62 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COLCA1Q6ZS62 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.83■□□□□ 0.93
COLCA1Q6ZS62 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.83■□□□□ 0.93
COLCA1Q6ZS62 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COLCA1Q6ZS62 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COLCA1Q6ZS62 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COLCA1Q6ZS62 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COLCA1Q6ZS62 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COLCA1Q6ZS62 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COLCA1Q6ZS62 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COLCA1Q6ZS62 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COLCA1Q6ZS62 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.82■□□□□ 0.92
COLCA1Q6ZS62 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 HSD17B1P1-201ENST00000590052 955 ntBASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 AC026202.3-201ENST00000600805 1127 ntBASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COLCA1Q6ZS62 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COLCA1Q6ZS62 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
COLCA1Q6ZS62 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COLCA1Q6ZS62 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms