Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM88Q6PEY1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TMEM88Q6PEY1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TMEM88Q6PEY1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88Q6PEY1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88Q6PEY1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88Q6PEY1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM88Q6PEY1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM88Q6PEY1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM88Q6PEY1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM88Q6PEY1 AC138932.3-201ENST00000567634 1902 ntBASIC19.32■□□□□ 0.68
TMEM88Q6PEY1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM88Q6PEY1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM88Q6PEY1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 SUZ12P1-203ENST00000578195 985 ntBASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM88Q6PEY1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM88Q6PEY1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEM88Q6PEY1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88Q6PEY1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM88Q6PEY1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM88Q6PEY1 SLC25A24-204ENST00000569674 2357 ntBASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 AP004833.2-201ENST00000532228 1454 ntBASIC19.28■□□□□ 0.68
TMEM88Q6PEY1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 CAHM-201ENST00000604200 896 ntBASIC19.27■□□□□ 0.68
TMEM88Q6PEY1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TMEM88Q6PEY1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88Q6PEY1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88Q6PEY1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88Q6PEY1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88Q6PEY1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM88Q6PEY1 AL391121.1-201ENST00000607967 1349 ntBASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM88Q6PEY1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM88Q6PEY1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM88Q6PEY1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM88Q6PEY1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 AC022211.4-201ENST00000625094 2161 ntBASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM88Q6PEY1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms