Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.88■■□□□ 1.09
TMEM53Q6P2H8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM53Q6P2H8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TMEM53Q6P2H8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM53Q6P2H8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM53Q6P2H8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 MIR219A2-201ENST00000608502 1504 ntBASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.85■■□□□ 1.09
TMEM53Q6P2H8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM53Q6P2H8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.84■■□□□ 1.09
TMEM53Q6P2H8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.84■■□□□ 1.09
TMEM53Q6P2H8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TMEM53Q6P2H8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM53Q6P2H8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM53Q6P2H8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM53Q6P2H8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TMEM53Q6P2H8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM53Q6P2H8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM53Q6P2H8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM53Q6P2H8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM53Q6P2H8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM53Q6P2H8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
TMEM53Q6P2H8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM53Q6P2H8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TMEM53Q6P2H8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM53Q6P2H8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM53Q6P2H8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 AL024507.2-201ENST00000606070 2574 ntBASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM53Q6P2H8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
TMEM53Q6P2H8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 AC091060.1-201ENST00000623524 1766 ntBASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM53Q6P2H8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TMEM53Q6P2H8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.75■■□□□ 1.07
TMEM53Q6P2H8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM53Q6P2H8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM53Q6P2H8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM53Q6P2H8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM53Q6P2H8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM53Q6P2H8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM53Q6P2H8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEM53Q6P2H8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TMEM53Q6P2H8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms