Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PPP4R3AQ6IN85 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.53■■■□□ 2
PPP4R3AQ6IN85 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
PPP4R3AQ6IN85 U85056.1-201ENST00000616429 682 ntBASIC27.53■■■□□ 2
PPP4R3AQ6IN85 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.53■■■□□ 2
PPP4R3AQ6IN85 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.53■■■□□ 2
PPP4R3AQ6IN85 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.52■■■□□ 2
PPP4R3AQ6IN85 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.52■■■□□ 2
PPP4R3AQ6IN85 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
PPP4R3AQ6IN85 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.51■■□□□ 1.99
PPP4R3AQ6IN85 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.51■■□□□ 1.99
PPP4R3AQ6IN85 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.51■■□□□ 1.99
PPP4R3AQ6IN85 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
PPP4R3AQ6IN85 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PPP4R3AQ6IN85 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PPP4R3AQ6IN85 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PPP4R3AQ6IN85 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.5■■□□□ 1.99
PPP4R3AQ6IN85 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PPP4R3AQ6IN85 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
PPP4R3AQ6IN85 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.49■■□□□ 1.99
PPP4R3AQ6IN85 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
PPP4R3AQ6IN85 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PPP4R3AQ6IN85 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.49■■□□□ 1.99
PPP4R3AQ6IN85 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PPP4R3AQ6IN85 NTF6A-201ENST00000591175 560 ntBASIC27.48■■□□□ 1.99
PPP4R3AQ6IN85 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PPP4R3AQ6IN85 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PPP4R3AQ6IN85 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PPP4R3AQ6IN85 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R3AQ6IN85 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.46■■□□□ 1.99
PPP4R3AQ6IN85 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PPP4R3AQ6IN85 AC092803.2-201ENST00000564287 1899 ntBASIC27.46■■□□□ 1.99
PPP4R3AQ6IN85 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PPP4R3AQ6IN85 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PPP4R3AQ6IN85 AL592293.1-201ENST00000502889 1188 ntBASIC27.45■■□□□ 1.98
PPP4R3AQ6IN85 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PPP4R3AQ6IN85 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 AC091060.1-201ENST00000623524 1766 ntBASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PPP4R3AQ6IN85 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.42■■□□□ 1.98
PPP4R3AQ6IN85 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.42■■□□□ 1.98
PPP4R3AQ6IN85 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PPP4R3AQ6IN85 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PPP4R3AQ6IN85 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PPP4R3AQ6IN85 KRT18P60-201ENST00000312876 1297 ntBASIC27.41■■□□□ 1.98
PPP4R3AQ6IN85 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.41■■□□□ 1.98
PPP4R3AQ6IN85 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
PPP4R3AQ6IN85 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.4■■□□□ 1.98
PPP4R3AQ6IN85 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
PPP4R3AQ6IN85 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
PPP4R3AQ6IN85 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.38■■□□□ 1.97
PPP4R3AQ6IN85 ERN1-208ENST00000606895 2068 ntBASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.37■■□□□ 1.97
PPP4R3AQ6IN85 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.36■■□□□ 1.97
PPP4R3AQ6IN85 DUSP8P4-201ENST00000399538 1761 ntBASIC27.36■■□□□ 1.97
PPP4R3AQ6IN85 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PPP4R3AQ6IN85 AC010501.1-201ENST00000606270 1962 ntBASIC27.36■■□□□ 1.97
PPP4R3AQ6IN85 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 AC145676.1-201ENST00000514988 2004 ntBASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
PPP4R3AQ6IN85 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms