Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PAX9P55771 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAX9P55771 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAX9P55771 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.41■□□□□ 0.7
PAX9P55771 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.41■□□□□ 0.7
PAX9P55771 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PAX9P55771 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX9P55771 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX9P55771 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX9P55771 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.4■□□□□ 0.7
PAX9P55771 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX9P55771 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX9P55771 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.4■□□□□ 0.7
PAX9P55771 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.4■□□□□ 0.7
PAX9P55771 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.4■□□□□ 0.7
PAX9P55771 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PAX9P55771 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PAX9P55771 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PAX9P55771 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.39■□□□□ 0.69
PAX9P55771 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PAX9P55771 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.39■□□□□ 0.69
PAX9P55771 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.38■□□□□ 0.69
PAX9P55771 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.38■□□□□ 0.69
PAX9P55771 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PAX9P55771 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 LINC01124-201ENST00000409786 2117 ntBASIC19.37■□□□□ 0.69
PAX9P55771 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PAX9P55771 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.37■□□□□ 0.69
PAX9P55771 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.37■□□□□ 0.69
PAX9P55771 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX9P55771 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PAX9P55771 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.36■□□□□ 0.69
PAX9P55771 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAX9P55771 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PAX9P55771 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
PAX9P55771 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
PAX9P55771 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.36■□□□□ 0.69
PAX9P55771 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAX9P55771 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAX9P55771 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAX9P55771 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PAX9P55771 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.35■□□□□ 0.69
PAX9P55771 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAX9P55771 AP006261.1-201ENST00000584783 668 ntBASIC19.35■□□□□ 0.69
PAX9P55771 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PAX9P55771 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
PAX9P55771 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAX9P55771 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAX9P55771 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.34■□□□□ 0.69
PAX9P55771 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PAX9P55771 AC012676.1-201ENST00000574705 1949 ntBASIC19.34■□□□□ 0.69
PAX9P55771 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.34■□□□□ 0.69
PAX9P55771 MIR3665-201ENST00000578708 105 ntBASIC19.34■□□□□ 0.69
PAX9P55771 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PAX9P55771 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PAX9P55771 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAX9P55771 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAX9P55771 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PAX9P55771 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.33■□□□□ 0.69
PAX9P55771 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.33■□□□□ 0.69
PAX9P55771 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PAX9P55771 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAX9P55771 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.33■□□□□ 0.68
PAX9P55771 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PAX9P55771 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAX9P55771 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.33■□□□□ 0.68
PAX9P55771 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAX9P55771 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PAX9P55771 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAX9P55771 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PAX9P55771 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 AP003733.4-201ENST00000623785 1697 ntBASIC19.32■□□□□ 0.68
PAX9P55771 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX9P55771 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAX9P55771 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAX9P55771 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms