Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21■□□□□ 0.95
RFX2P48378 AC135983.2-203ENST00000454486 1613 ntBASIC21■□□□□ 0.95
RFX2P48378 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RFX2P48378 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RFX2P48378 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.99■□□□□ 0.95
RFX2P48378 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFX2P48378 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX2P48378 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RFX2P48378 AC097639.1-201ENST00000565519 1891 ntBASIC20.99■□□□□ 0.95
RFX2P48378 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.99■□□□□ 0.95
RFX2P48378 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX2P48378 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX2P48378 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX2P48378 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX2P48378 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX2P48378 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX2P48378 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX2P48378 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX2P48378 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RFX2P48378 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX2P48378 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX2P48378 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RFX2P48378 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX2P48378 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX2P48378 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX2P48378 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX2P48378 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX2P48378 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX2P48378 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX2P48378 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX2P48378 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX2P48378 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX2P48378 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX2P48378 WHAMMP3-201ENST00000611636 1609 ntBASIC20.95■□□□□ 0.94
RFX2P48378 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX2P48378 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX2P48378 LINC01124-201ENST00000409786 2117 ntBASIC20.95■□□□□ 0.94
RFX2P48378 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX2P48378 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX2P48378 WHAMMP2-203ENST00000563942 1603 ntBASIC20.94■□□□□ 0.94
RFX2P48378 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 AC142472.1-201ENST00000612013 1741 ntBASIC20.94■□□□□ 0.94
RFX2P48378 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFX2P48378 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX2P48378 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.93■□□□□ 0.94
RFX2P48378 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RFX2P48378 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX2P48378 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.92■□□□□ 0.94
RFX2P48378 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFX2P48378 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX2P48378 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.91■□□□□ 0.94
RFX2P48378 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.91■□□□□ 0.94
RFX2P48378 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX2P48378 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFX2P48378 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX2P48378 DUSP8P5-201ENST00000422884 1815 ntBASIC20.9■□□□□ 0.94
RFX2P48378 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX2P48378 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RFX2P48378 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX2P48378 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX2P48378 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX2P48378 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.89■□□□□ 0.94
RFX2P48378 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX2P48378 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.89■□□□□ 0.94
RFX2P48378 AC136428.2-201ENST00000563187 214 ntBASIC20.89■□□□□ 0.93
RFX2P48378 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX2P48378 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX2P48378 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 MIR762-201ENST00000390236 83 ntBASIC20.88■□□□□ 0.93
RFX2P48378 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX2P48378 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX2P48378 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX2P48378 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX2P48378 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX2P48378 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.87■□□□□ 0.93
RFX2P48378 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX2P48378 AC096887.2-201ENST00000623443 1957 ntBASIC20.86■□□□□ 0.93
RFX2P48378 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX2P48378 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX2P48378 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX2P48378 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFX2P48378 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFX2P48378 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFX2P48378 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.86■□□□□ 0.93
RFX2P48378 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.86■□□□□ 0.93
RFX2P48378 AC097358.2-201ENST00000607541 1159 ntBASIC20.86■□□□□ 0.93
RFX2P48378 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms