Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SDHAP31040 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDHAP31040 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SDHAP31040 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.65■■□□□ 1.06
SDHAP31040 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDHAP31040 AC096887.2-201ENST00000623443 1957 ntBASIC21.65■■□□□ 1.06
SDHAP31040 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.65■■□□□ 1.06
SDHAP31040 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.64■■□□□ 1.06
SDHAP31040 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDHAP31040 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDHAP31040 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.64■■□□□ 1.05
SDHAP31040 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
SDHAP31040 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SDHAP31040 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SDHAP31040 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.63■■□□□ 1.05
SDHAP31040 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SDHAP31040 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SDHAP31040 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SDHAP31040 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SDHAP31040 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.62■■□□□ 1.05
SDHAP31040 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SDHAP31040 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SDHAP31040 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.62■■□□□ 1.05
SDHAP31040 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SDHAP31040 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.62■■□□□ 1.05
SDHAP31040 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SDHAP31040 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SDHAP31040 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SDHAP31040 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SDHAP31040 MIR7108-201ENST00000614319 87 ntBASIC21.61■■□□□ 1.05
SDHAP31040 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SDHAP31040 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SDHAP31040 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.6■■□□□ 1.05
SDHAP31040 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.6■■□□□ 1.05
SDHAP31040 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SDHAP31040 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SDHAP31040 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SDHAP31040 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SDHAP31040 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SDHAP31040 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.59■■□□□ 1.05
SDHAP31040 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SDHAP31040 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.59■■□□□ 1.05
SDHAP31040 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.59■■□□□ 1.05
SDHAP31040 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.59■■□□□ 1.05
SDHAP31040 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SDHAP31040 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.59■■□□□ 1.05
SDHAP31040 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SDHAP31040 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SDHAP31040 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SDHAP31040 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SDHAP31040 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SDHAP31040 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SDHAP31040 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SDHAP31040 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SDHAP31040 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SDHAP31040 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SDHAP31040 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.58■■□□□ 1.04
SDHAP31040 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SDHAP31040 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.57■■□□□ 1.04
SDHAP31040 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.57■■□□□ 1.04
SDHAP31040 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SDHAP31040 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SDHAP31040 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SDHAP31040 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SDHAP31040 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDHAP31040 AL157400.5-201ENST00000507624 621 ntBASIC21.55■■□□□ 1.04
SDHAP31040 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDHAP31040 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.55■■□□□ 1.04
SDHAP31040 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SDHAP31040 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDHAP31040 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SDHAP31040 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDHAP31040 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.54■■□□□ 1.04
SDHAP31040 AC142381.3-201ENST00000568208 1670 ntBASIC21.53■■□□□ 1.04
SDHAP31040 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDHAP31040 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.53■■□□□ 1.04
SDHAP31040 AC060814.1-201ENST00000554326 538 ntBASIC21.53■■□□□ 1.04
SDHAP31040 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SDHAP31040 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms