Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGN1P05114 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGN1P05114 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.79■■□□□ 1.08
HMGN1P05114 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HMGN1P05114 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGN1P05114 MIR219A2-201ENST00000608502 1504 ntBASIC21.79■■□□□ 1.08
HMGN1P05114 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGN1P05114 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGN1P05114 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGN1P05114 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGN1P05114 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGN1P05114 AC096887.2-201ENST00000623443 1957 ntBASIC21.78■■□□□ 1.08
HMGN1P05114 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGN1P05114 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGN1P05114 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HMGN1P05114 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HMGN1P05114 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HMGN1P05114 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGN1P05114 AC138932.3-201ENST00000567634 1902 ntBASIC21.76■■□□□ 1.07
HMGN1P05114 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGN1P05114 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HMGN1P05114 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HMGN1P05114 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGN1P05114 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HMGN1P05114 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.75■■□□□ 1.07
HMGN1P05114 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
HMGN1P05114 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGN1P05114 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HMGN1P05114 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.74■■□□□ 1.07
HMGN1P05114 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HMGN1P05114 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
HMGN1P05114 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 AL359258.2-201ENST00000564063 1566 ntBASIC21.73■■□□□ 1.07
HMGN1P05114 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HMGN1P05114 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.72■■□□□ 1.07
HMGN1P05114 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.72■■□□□ 1.07
HMGN1P05114 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.72■■□□□ 1.07
HMGN1P05114 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGN1P05114 AL139125.2-201ENST00000623134 1869 ntBASIC21.72■■□□□ 1.07
HMGN1P05114 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGN1P05114 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
HMGN1P05114 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGN1P05114 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 AL359504.2-201ENST00000605506 1601 ntBASIC21.71■■□□□ 1.07
HMGN1P05114 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.71■■□□□ 1.07
HMGN1P05114 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.71■■□□□ 1.07
HMGN1P05114 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGN1P05114 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGN1P05114 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGN1P05114 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.7■■□□□ 1.06
HMGN1P05114 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGN1P05114 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.7■■□□□ 1.06
HMGN1P05114 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGN1P05114 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HMGN1P05114 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.69■■□□□ 1.06
HMGN1P05114 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HMGN1P05114 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.69■■□□□ 1.06
HMGN1P05114 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGN1P05114 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGN1P05114 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
HMGN1P05114 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGN1P05114 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGN1P05114 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGN1P05114 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.67■■□□□ 1.06
HMGN1P05114 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HMGN1P05114 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.67■■□□□ 1.06
HMGN1P05114 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGN1P05114 DUX4L11-201ENST00000611504 1267 ntBASIC21.67■■□□□ 1.06
HMGN1P05114 DUX4L12-201ENST00000614593 1267 ntBASIC21.67■■□□□ 1.06
HMGN1P05114 DUX4L14-201ENST00000621227 1267 ntBASIC21.67■■□□□ 1.06
HMGN1P05114 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGN1P05114 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HMGN1P05114 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGN1P05114 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HMGN1P05114 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGN1P05114 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.66■■□□□ 1.06
HMGN1P05114 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms