Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
APOC3P02656 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOC3P02656 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC3P02656 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
APOC3P02656 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.54■□□□□ 0.72
APOC3P02656 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC3P02656 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC3P02656 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC3P02656 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOC3P02656 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOC3P02656 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
APOC3P02656 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOC3P02656 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOC3P02656 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
APOC3P02656 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
APOC3P02656 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOC3P02656 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOC3P02656 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOC3P02656 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
APOC3P02656 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
APOC3P02656 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
APOC3P02656 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
APOC3P02656 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.51■□□□□ 0.71
APOC3P02656 DUSP8P5-201ENST00000422884 1815 ntBASIC19.51■□□□□ 0.71
APOC3P02656 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APOC3P02656 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
APOC3P02656 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APOC3P02656 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
APOC3P02656 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOC3P02656 AC022211.4-201ENST00000625094 2161 ntBASIC19.51■□□□□ 0.71
APOC3P02656 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APOC3P02656 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOC3P02656 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOC3P02656 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOC3P02656 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
APOC3P02656 SLC25A24-204ENST00000569674 2357 ntBASIC19.5■□□□□ 0.71
APOC3P02656 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOC3P02656 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOC3P02656 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.49■□□□□ 0.71
APOC3P02656 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.49■□□□□ 0.71
APOC3P02656 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.49■□□□□ 0.71
APOC3P02656 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 AC097639.1-201ENST00000565519 1891 ntBASIC19.49■□□□□ 0.71
APOC3P02656 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 AC010864.1-201ENST00000609407 1511 ntBASIC19.49■□□□□ 0.71
APOC3P02656 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APOC3P02656 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOC3P02656 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
APOC3P02656 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.48■□□□□ 0.71
APOC3P02656 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOC3P02656 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
APOC3P02656 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APOC3P02656 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APOC3P02656 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC3P02656 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
APOC3P02656 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC3P02656 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC3P02656 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC3P02656 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
APOC3P02656 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC3P02656 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC3P02656 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC3P02656 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
APOC3P02656 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC3P02656 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC3P02656 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC3P02656 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC3P02656 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC3P02656 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APOC3P02656 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC3P02656 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
APOC3P02656 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC3P02656 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC3P02656 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.44■□□□□ 0.7
APOC3P02656 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 LINC00565-201ENST00000562710 2331 ntBASIC19.44■□□□□ 0.7
APOC3P02656 AL117328.2-201ENST00000624617 1940 ntBASIC19.44■□□□□ 0.7
APOC3P02656 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
APOC3P02656 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC3P02656 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.43■□□□□ 0.7
APOC3P02656 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
APOC3P02656 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.43■□□□□ 0.7
APOC3P02656 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.43■□□□□ 0.7
APOC3P02656 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
APOC3P02656 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms