Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.59■■□□□ 1.37
NPHS1O60500 DUX4L11-201ENST00000611504 1267 ntBASIC23.59■■□□□ 1.37
NPHS1O60500 DUX4L12-201ENST00000614593 1267 ntBASIC23.59■■□□□ 1.37
NPHS1O60500 DUX4L14-201ENST00000621227 1267 ntBASIC23.59■■□□□ 1.37
NPHS1O60500 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.59■■□□□ 1.37
NPHS1O60500 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NPHS1O60500 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
NPHS1O60500 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NPHS1O60500 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NPHS1O60500 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPHS1O60500 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NPHS1O60500 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPHS1O60500 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
NPHS1O60500 AL139125.2-201ENST00000623134 1869 ntBASIC23.58■■□□□ 1.36
NPHS1O60500 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NPHS1O60500 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
NPHS1O60500 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NPHS1O60500 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPHS1O60500 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.57■■□□□ 1.36
NPHS1O60500 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 HLA-V-202ENST00000446817 847 ntBASIC23.56■■□□□ 1.36
NPHS1O60500 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPHS1O60500 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NPHS1O60500 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPHS1O60500 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.55■■□□□ 1.36
NPHS1O60500 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.55■■□□□ 1.36
NPHS1O60500 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.55■■□□□ 1.36
NPHS1O60500 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.55■■□□□ 1.36
NPHS1O60500 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPHS1O60500 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NPHS1O60500 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.55■■□□□ 1.36
NPHS1O60500 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPHS1O60500 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.54■■□□□ 1.36
NPHS1O60500 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPHS1O60500 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPHS1O60500 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPHS1O60500 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.54■■□□□ 1.36
NPHS1O60500 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NPHS1O60500 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NPHS1O60500 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.53■■□□□ 1.36
NPHS1O60500 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.53■■□□□ 1.36
NPHS1O60500 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NPHS1O60500 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
NPHS1O60500 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NPHS1O60500 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.52■■□□□ 1.36
NPHS1O60500 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NPHS1O60500 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NPHS1O60500 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NPHS1O60500 RPS2P35-201ENST00000443417 897 ntBASIC23.51■■□□□ 1.35
NPHS1O60500 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.51■■□□□ 1.35
NPHS1O60500 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NPHS1O60500 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPHS1O60500 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPHS1O60500 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPHS1O60500 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPHS1O60500 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.5■■□□□ 1.35
NPHS1O60500 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPHS1O60500 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NPHS1O60500 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.49■■□□□ 1.35
NPHS1O60500 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.49■■□□□ 1.35
NPHS1O60500 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.49■■□□□ 1.35
NPHS1O60500 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPHS1O60500 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.48■■□□□ 1.35
NPHS1O60500 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.48■■□□□ 1.35
NPHS1O60500 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPHS1O60500 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPHS1O60500 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.48■■□□□ 1.35
NPHS1O60500 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPHS1O60500 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPHS1O60500 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPHS1O60500 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPHS1O60500 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
NPHS1O60500 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NPHS1O60500 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPHS1O60500 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NPHS1O60500 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.46■■□□□ 1.35
NPHS1O60500 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NPHS1O60500 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NPHS1O60500 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NPHS1O60500 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NPHS1O60500 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms