Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA12O60330 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA12O60330 THA1P-201ENST00000590384 1145 ntBASIC24.01■■□□□ 1.43
PCDHGA12O60330 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHGA12O60330 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGA12O60330 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA12O60330 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHGA12O60330 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGA12O60330 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGA12O60330 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PCDHGA12O60330 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
PCDHGA12O60330 AL121749.1-202ENST00000609313 2153 ntBASIC24■■□□□ 1.43
PCDHGA12O60330 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA12O60330 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA12O60330 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDHGA12O60330 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.99■■□□□ 1.43
PCDHGA12O60330 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA12O60330 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHGA12O60330 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
PCDHGA12O60330 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 WHAMMP3-201ENST00000611636 1609 ntBASIC23.98■■□□□ 1.43
PCDHGA12O60330 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PCDHGA12O60330 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA12O60330 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA12O60330 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA12O60330 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA12O60330 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA12O60330 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA12O60330 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDHGA12O60330 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 AC019069.1-201ENST00000610008 1333 ntBASIC23.96■■□□□ 1.43
PCDHGA12O60330 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHGA12O60330 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA12O60330 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 AC087393.1-201ENST00000582896 145 ntBASIC23.96■■□□□ 1.43
PCDHGA12O60330 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA12O60330 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PCDHGA12O60330 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHGA12O60330 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHGA12O60330 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
PCDHGA12O60330 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA12O60330 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA12O60330 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA12O60330 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA12O60330 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA12O60330 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA12O60330 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA12O60330 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA12O60330 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA12O60330 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA12O60330 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA12O60330 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA12O60330 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHGA12O60330 AL356441.2-201ENST00000443009 864 ntBASIC23.93■■□□□ 1.42
PCDHGA12O60330 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGA12O60330 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA12O60330 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PCDHGA12O60330 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHGA12O60330 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA12O60330 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA12O60330 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGA12O60330 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGA12O60330 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.91■■□□□ 1.42
PCDHGA12O60330 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHGA12O60330 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHGA12O60330 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDHGA12O60330 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA12O60330 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA12O60330 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHGA12O60330 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA12O60330 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA12O60330 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGA12O60330 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA12O60330 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGA12O60330 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHGA12O60330 RPS2P7-201ENST00000447334 885 ntBASIC23.88■■□□□ 1.41
PCDHGA12O60330 Z92544.1-202ENST00000571933 1220 ntBASIC23.88■■□□□ 1.41
PCDHGA12O60330 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHGA12O60330 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA12O60330 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA12O60330 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms