Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSSCA1O60232 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSSCA1O60232 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSSCA1O60232 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.61■□□□□ 0.73
SSSCA1O60232 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.61■□□□□ 0.73
SSSCA1O60232 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SSSCA1O60232 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.61■□□□□ 0.73
SSSCA1O60232 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.6■□□□□ 0.73
SSSCA1O60232 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
SSSCA1O60232 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SSSCA1O60232 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
SSSCA1O60232 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.6■□□□□ 0.73
SSSCA1O60232 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSSCA1O60232 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SSSCA1O60232 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SSSCA1O60232 SUZ12P1-203ENST00000578195 985 ntBASIC19.59■□□□□ 0.73
SSSCA1O60232 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSSCA1O60232 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSSCA1O60232 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSSCA1O60232 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSSCA1O60232 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSSCA1O60232 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSSCA1O60232 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSSCA1O60232 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SSSCA1O60232 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSSCA1O60232 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSSCA1O60232 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSSCA1O60232 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.57■□□□□ 0.72
SSSCA1O60232 AC133561.1-201ENST00000568600 2415 ntBASIC19.57■□□□□ 0.72
SSSCA1O60232 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSSCA1O60232 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSSCA1O60232 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSSCA1O60232 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSSCA1O60232 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSSCA1O60232 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSSCA1O60232 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
SSSCA1O60232 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSSCA1O60232 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.55■□□□□ 0.72
SSSCA1O60232 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSSCA1O60232 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
SSSCA1O60232 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSSCA1O60232 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.55■□□□□ 0.72
SSSCA1O60232 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSSCA1O60232 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
SSSCA1O60232 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
SSSCA1O60232 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSSCA1O60232 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.54■□□□□ 0.72
SSSCA1O60232 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSSCA1O60232 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSSCA1O60232 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSSCA1O60232 AC096887.2-201ENST00000623443 1957 ntBASIC19.53■□□□□ 0.72
SSSCA1O60232 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SSSCA1O60232 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.53■□□□□ 0.72
SSSCA1O60232 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSSCA1O60232 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSSCA1O60232 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSSCA1O60232 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SSSCA1O60232 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.53■□□□□ 0.72
SSSCA1O60232 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.53■□□□□ 0.72
SSSCA1O60232 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSSCA1O60232 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.52■□□□□ 0.72
SSSCA1O60232 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSSCA1O60232 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSSCA1O60232 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSSCA1O60232 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.52■□□□□ 0.72
SSSCA1O60232 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSSCA1O60232 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSSCA1O60232 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSSCA1O60232 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SSSCA1O60232 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSSCA1O60232 LINC01124-201ENST00000409786 2117 ntBASIC19.5■□□□□ 0.71
SSSCA1O60232 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSSCA1O60232 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.5■□□□□ 0.71
SSSCA1O60232 DUX4L28-201ENST00000623687 678 ntBASIC19.5■□□□□ 0.71
SSSCA1O60232 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSSCA1O60232 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSSCA1O60232 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSSCA1O60232 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SSSCA1O60232 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSSCA1O60232 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.49■□□□□ 0.71
SSSCA1O60232 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSSCA1O60232 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSSCA1O60232 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.48■□□□□ 0.71
SSSCA1O60232 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSSCA1O60232 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSSCA1O60232 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSSCA1O60232 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.48■□□□□ 0.71
SSSCA1O60232 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
SSSCA1O60232 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.47■□□□□ 0.71
SSSCA1O60232 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms